Package: bayefdr
Type: Package
Title: Bayesian Estimation and Optimisation of Expected False Discovery
        Rate
Version: 0.2.0
Date: 2021-09-18
Authors@R: c(
        person("Alan", "O'Callaghan",
            email = "alan.ocallaghan@outlook.com",
            role = c("aut", "cre")
        ),
        person("Catalina", "Vallejos", role = "aut")
    )
Description: Implements the Bayesian FDR control described by Newton et
        al. (2004), <doi:10.1093/biostatistics/5.2.155>. Allows
        optimisation and visualisation of expected error rates based on
        tail posterior probability tests. Based on code written by
        Catalina Vallejos for BASiCS, see Beyond comparisons of means:
        understanding changes in gene expression at the single-cell
        level Vallejos et al. (2016) <doi:10.1186/s13059-016-0930-3>.
Imports: ggplot2, reshape2, assertthat, utils, cowplot, ggExtra, stats
License: GPL-3
BugReports: https://github.com/VallejosGroup/bayefdr/issues
RoxygenNote: 7.1.2
Encoding: UTF-8
Suggests: testthat, pkgdown
Language: en-gb
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev zlib1g-dev
Repository: https://vallejosgroup.r-universe.dev
Date/Publication: 2021-09-29 16:05:02 UTC
RemoteUrl: https://github.com/vallejosgroup/bayefdr
RemoteRef: HEAD
RemoteSha: 319682517c8d2f190da703dcb5b4941fb18196e8
NeedsCompilation: no
Packaged: 2026-05-26 07:15:18 UTC; root
Author: Alan O'Callaghan [aut, cre],
  Catalina Vallejos [aut]
Maintainer: Alan O'Callaghan <alan.ocallaghan@outlook.com>